Downloads

Genome assembly v1.0

Scaffolds (md5) (fasta, qual file, gzipped tar-ball)

Thaps-Phtri-Psemu-trained Maker2 gene models (27 337):

• gene structures (md5) (gff, gzipped)
• repeats (md5) (gff, gzipped)
• tRNAs (md5) (gff, gzipped)
• ncRNAs (md5) (gff, gzipped)

Functional annotation:

• GO-terms (md5), EC-codes and gene names, mapped to gene ids (tab-delimited, gzipped tar-ball)
• BLAST VS NR-database (xml (md5) or tab-delimited (md5), gzipped tar-ball)

OrthoMCL (analysis of gene families):

• Predicted amino-acid sequences (md5) of Thalassiosira pseudonana (tps), Phaeodactylum tricornutum (ptr), Fragilariopsis cylindrus (fcy), Pseudo-nitzschia multiseries (pmu), and S. acus subsp. radians (sac) genes (fasta, OrtoMCL-compliant headers, gzipped tar-ball)
• Input files (md5) for MCL algorithm (gzipped tar-ball)
• OrthoMCL groups (md5) (two-column txt, gzipped)